Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-508-3p in COID Lung Bhattacharjee Cluster 79 Table contains all genes in the COID Lung Bhattacharjee cluster number 79. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-508-3p 10180 RBM6 RNA binding motif protein 6 [Source:HGNC Symbol;Acc:9903] zzz999 27076 LYPD3 LY6/PLAUR domain containing 3 [Source:HGNC Symbol;Acc:24880] zzz999 23239 PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:20610] T 26608 TBL2 transducin (beta)-like 2 [Source:HGNC Symbol;Acc:11586] zzz999 259197 NCR3 natural cytotoxicity triggering receptor 3 [Source:HGNC Symbol;Acc:19077] zzz999 10985 GCN1L1 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) [Source:HGNC Symbol;Acc:4199] zzz999 8890 EIF2B4 eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa [Source:HGNC Symbol;Acc:3260] zzz999 10297 APC2 adenomatosis polyposis coli 2 [Source:HGNC Symbol;Acc:24036] T 4216 MAP3K4 mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:6856] zzz999 6605 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:11109] zzz999 10966 RAB40B RAB40B, member RAS oncogene family [Source:HGNC Symbol;Acc:18284] zzz999 3838 KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:HGNC Symbol;Acc:6395] zzz999 6905 TBCE tubulin folding cofactor E [Source:HGNC Symbol;Acc:11582] zzz999 885 CCK cholecystokinin [Source:HGNC Symbol;Acc:1569] T 5440 POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa [Source:HGNC Symbol;Acc:9198] zzz999 6276 S100A5 S100 calcium binding protein A5 [Source:HGNC Symbol;Acc:10495] zzz999 7142 TNP2 transition protein 2 (during histone to protamine replacement) [Source:HGNC Symbol;Acc:11952] zzz999 926 CD8B CD8b molecule [Source:HGNC Symbol;Acc:1707] zzz999 10382 TUBB4 tubulin, beta 4 [Source:HGNC Symbol;Acc:20774] zzz999 7064 THOP1 thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:11793] zzz999 8895 CPNE3 copine III [Source:HGNC Symbol;Acc:2316] T 9848 MFAP3L microfibrillar-associated protein 3-like [Source:HGNC Symbol;Acc:29083] T 5203 PFDN4 prefoldin subunit 4 [Source:HGNC Symbol;Acc:8868] T 8292 COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:HGNC Symbol;Acc:2226] zzz999 9670 IPO13 importin 13 [Source:HGNC Symbol;Acc:16853] zzz999 65018 PINK1 PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:14581] zzz999 1620 DBC1 deleted in bladder cancer 1 [Source:HGNC Symbol;Acc:2687] zzz999 3849 KRT2 keratin 2 [Source:HGNC Symbol;Acc:6439] zzz999 2483 FRG1 FSHD region gene 1 [Source:HGNC Symbol;Acc:3954] zzz999 8618 CADPS Ca++-dependent secretion activator [Source:HGNC Symbol;Acc:1426] zzz999 22911 WDR47 WD repeat domain 47 [Source:HGNC Symbol;Acc:29141] zzz999 3066 HDAC2 histone deacetylase 2 [Source:HGNC Symbol;Acc:4853] zzz999 4520 MTF1 metal-regulatory transcription factor 1 [Source:HGNC Symbol;Acc:7428] T 8153 RND2 Rho family GTPase 2 [Source:HGNC Symbol;Acc:18315] zzz999 1748 DLX4 distal-less homeobox 4 [Source:HGNC Symbol;Acc:2917] zzz999 8704 B4GALT2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:HGNC Symbol;Acc:925] zzz999 8840 WISP1 WNT1 inducible signaling pathway protein 1 [Source:HGNC Symbol;Acc:12769] zzz999 1571 CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1 [Source:HGNC Symbol;Acc:2631] zzz999 4846 NOS3 nitric oxide synthase 3 (endothelial cell) [Source:HGNC Symbol;Acc:7876] zzz999 8565 YARS tyrosyl-tRNA synthetase [Source:HGNC Symbol;Acc:12840] zzz999 26121 PRPF31 PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:15446] zzz999 9662 CEP135 centrosomal protein 135kDa [Source:HGNC Symbol;Acc:29086] zzz999 23112 TNRC6B trinucleotide repeat containing 6B [Source:HGNC Symbol;Acc:29190] zzz999 9256 BZRAP1 benzodiazapine receptor (peripheral) associated protein 1 [Source:HGNC Symbol;Acc:16831] zzz999 5100 PCDH8 protocadherin 8 [Source:HGNC Symbol;Acc:8660] zzz999 84890 ADO 2-aminoethanethiol (cysteamine) dioxygenase [Source:HGNC Symbol;Acc:23506] zzz999 6098 ROS1 c-ros oncogene 1 , receptor tyrosine kinase [Source:HGNC Symbol;Acc:10261] zzz999 57613 KIAA1467 KIAA1467 [Source:HGNC Symbol;Acc:29288] zzz999 1215 CMA1 chymase 1, mast cell [Source:HGNC Symbol;Acc:2097] zzz999 79033 ERI3 ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:17276] zzz999 25834 MGAT4C mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) [Source:HGNC Symbol;Acc:30871] zzz999 10523 CHERP calcium homeostasis endoplasmic reticulum protein [Source:HGNC Symbol;Acc:16930] zzz999 11325 DDX42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Source:HGNC Symbol;Acc:18676] zzz999 3752 KCND3 potassium voltage-gated channel, Shal-related subfamily, member 3 [Source:HGNC Symbol;Acc:6239] zzz999 10409 BASP1 brain abundant, membrane attached signal protein 1 [Source:HGNC Symbol;Acc:957] zzz999 5048 PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) [Source:HGNC Symbol;Acc:8574] zzz999 9859 CEP170 centrosomal protein 170kDa [Source:HGNC Symbol;Acc:28920] P T 22858 ICK intestinal cell (MAK-like) kinase [Source:HGNC Symbol;Acc:21219] T 605 BCL7A B-cell CLL/lymphoma 7A [Source:HGNC Symbol;Acc:1004] zzz999 114876 OSBPL1A oxysterol binding protein-like 1A [Source:HGNC Symbol;Acc:16398] zzz999 2028 ENPEP glutamyl aminopeptidase (aminopeptidase A) [Source:HGNC Symbol;Acc:3355] T 1463 NCAN neurocan [Source:HGNC Symbol;Acc:2465] T 7580 ZNF32 zinc finger protein 32 [Source:HGNC Symbol;Acc:13095] zzz999 314 AOC2 amine oxidase, copper containing 2 (retina-specific) [Source:HGNC Symbol;Acc:549] zzz999 10289 EIF1B eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:30792] zzz999 9401 zzz999 zzz999 zzz999 4753 NELL2 NEL-like 2 (chicken) [Source:HGNC Symbol;Acc:7751] zzz999 23051 ZHX3 zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:15935] zzz999 5961 PRPH2 peripherin 2 (retinal degeneration, slow) [Source:HGNC Symbol;Acc:9942] T 1339 COX6A2 cytochrome c oxidase subunit VIa polypeptide 2 [Source:HGNC Symbol;Acc:2279] zzz999 25949 SYF2 SYF2 homolog, RNA splicing factor (S. cerevisiae) [Source:HGNC Symbol;Acc:19824] T 1489 CTF1 cardiotrophin 1 [Source:HGNC Symbol;Acc:2499] zzz999 317 APAF1 apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:576] T 3780 KCNN1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 [Source:HGNC Symbol;Acc:6290] zzz999 10951 CBX1 chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] zzz999 229 ALDOB aldolase B, fructose-bisphosphate [Source:HGNC Symbol;Acc:417] zzz999 971 CD72 CD72 molecule [Source:HGNC Symbol;Acc:1696] zzz999 5260 PHKG1 phosphorylase kinase, gamma 1 (muscle) [Source:HGNC Symbol;Acc:8930] zzz999 3359 HTR3A 5-hydroxytryptamine (serotonin) receptor 3A [Source:HGNC Symbol;Acc:5297] zzz999 5803 PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 [Source:HGNC Symbol;Acc:9685] zzz999 152789 JAKMIP1 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:26460] zzz999 375057 C1orf95 chromosome 1 open reading frame 95 [Source:HGNC Symbol;Acc:30491] T 8884 SLC5A6 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 [Source:HGNC Symbol;Acc:11041] zzz999 1485 CTAG1B cancer/testis antigen 1B [Source:HGNC Symbol;Acc:2491] zzz999 2571 GAD1 glutamate decarboxylase 1 (brain, 67kDa) [Source:HGNC Symbol;Acc:4092] zzz999 10716 TBR1 T-box, brain, 1 [Source:HGNC Symbol;Acc:11590] zzz999 23506 KIAA0240 KIAA0240 [Source:HGNC Symbol;Acc:21111] T 54469 ZFAND6 zinc finger, AN1-type domain 6 [Source:HGNC Symbol;Acc:30164] zzz999 10943 MSL3 male-specific lethal 3 homolog (Drosophila) [Source:HGNC Symbol;Acc:7370] T 27302 BMP10 bone morphogenetic protein 10 [Source:HGNC Symbol;Acc:20869] zzz999 84823 LMNB2 lamin B2 [Source:HGNC Symbol;Acc:6638] zzz999 26576 SRPK3 SRSF protein kinase 3 [Source:HGNC Symbol;Acc:11402] zzz999

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